DnpInfo Class Reference

#include <featureinfo.h>

Inheritance diagram for DnpInfo:

[legend]Collaboration diagram for DnpInfo:

[legend]List of all members.

Public Member Functions
	DnpInfo (FeatureData *data)
std::string	myInfoPos (TR_DNA pos)
std::string	myInfoRange (TR_DNA begin, TR_DNA end)
Private Member Functions
DnpData *	dnpData ()

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Detailed Description

Definition at line 36 of file featureinfo.h.

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Constructor & Destructor Documentation

DnpInfo::DnpInfo (  FeatureData *  data  )  [inline]

Definition at line 39 of file featureinfo.h. : FeatureInfo(data) {}

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Member Function Documentation

DnpData * DnpInfo::dnpData (   )  [private]

Definition at line 59 of file featureinfo.cc. References FeatureInfo::m_data. Referenced by myInfoPos(), and myInfoRange(). { return dynamic_cast<DnpData *>( m_data ); }

std::string DnpInfo::myInfoPos (  TR_DNA  pos  )  [virtual]

Reimplemented from FeatureInfo. Definition at line 33 of file featureinfo.cc. References dnpData(), and DnpData::get_dnpID(). { assert( pos == dnpData()->startPos() ); assert( pos == dnpData()->endPos() ); ostringstream os; os<<"DNP ID: "<<dnpData()->get_dnpID(); return os.str(); }

std::string DnpInfo::myInfoRange (  TR_DNA  begin, TR_DNA  end )  [virtual]

Reimplemented from FeatureInfo. Definition at line 45 of file featureinfo.cc. References dnpData(), DnpData::get_dnpID(), and FeatureData::startPos(). { //Sanity check assert( dnpData()->startPos() == dnpData()->endPos() ); ostringstream os; os.str(""); if ( dnpData()->startPos() >= begin && dnpData()->startPos() <= end) { os<<"DNP ID: "<<dnpData()->get_dnpID()<<" at pos "<<dnpData()->startPos(); } return os.str(); }

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The documentation for this class was generated from the following files:

• featureinfo.h
• featureinfo.cc

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