algo.h

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/*******************************************************************************
 *                                                                             *
 *   Copyright (C) 2003 - 2006  Erik Sjolund and Erik Arner,                   *
 *                              Center for Genomics and Bioinformatics,        *
 *                              Karolinska Institutet,                         *
 *                              Stockholm,                                     *
 *                              Sweden                                         *
 *                                                                             *
 *  Author: Erik Sjolund                                                       *
 *  Email: erik.sjolund@adivo.se                                               *
 *                                                                             *
 *******************************************************************************
 */
#ifndef ALGO_H
#define ALGO_H

#include <qobject.h>
#include <list>
#include <db_cxx.h>
#include <set>

/**
@author Erik Sjolund
*/
#include <string>

class TrapperDoc;
class AlgoParam;

class Algo : public QObject
{
  Q_OBJECT
public:
  Algo(TrapperDoc * pDoc_, std::set< db_recno_t >& recnoList, AlgoParam* param = 0, QObject *parent = 0, const char *name = 0);
  virtual ~Algo();//Destructor should be virtual, right...??
  virtual void start() = 0;
  void select( db_recno_t recno, bool status );
  
protected:
  std::set< db_recno_t >& selectedReads;
  TrapperDoc * pDoc;
  AlgoParam* my_param;
};


#endif

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